Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm38348-201ENSMUST00000191718 2273 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
AlyrefO08583 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.11□□□□□ -0.63
AlyrefO08583 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
AlyrefO08583 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
AlyrefO08583 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC11.1□□□□□ -0.63
AlyrefO08583 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
AlyrefO08583 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm12047-201ENSMUST00000117561 944 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
AlyrefO08583 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Gm25288-201ENSMUST00000122800 265 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC11.1□□□□□ -0.63
AlyrefO08583 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.1□□□□□ -0.63
AlyrefO08583 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm18733-202ENSMUST00000174447 401 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Gm7928-201ENSMUST00000181249 701 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm19918-201ENSMUST00000194858 400 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Gm9771-201ENSMUST00000198267 1137 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
AlyrefO08583 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC11.1□□□□□ -0.63
AlyrefO08583 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Zfp389-202ENSMUST00000224437 1234 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm42852-201ENSMUST00000202649 1379 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
AlyrefO08583 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
AlyrefO08583 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.1□□□□□ -0.63
AlyrefO08583 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
AlyrefO08583 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
AlyrefO08583 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 AC130831.1-201ENSMUST00000224546 1474 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Gm15610-201ENSMUST00000120584 195 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC11.09□□□□□ -0.63
AlyrefO08583 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC11.09□□□□□ -0.63
AlyrefO08583 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC11.09□□□□□ -0.63
AlyrefO08583 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Gm22616-201ENSMUST00000179783 100 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 350.5 ms