Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm44173-201ENSMUST00000204316 132 ntBASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Gm18749-201ENSMUST00000222410 692 ntBASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc180J3QNE4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm3687-201ENSMUST00000161710 460 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm29487-201ENSMUST00000190146 256 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm42780-201ENSMUST00000197083 734 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm18119-201ENSMUST00000219972 616 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm15991-202ENSMUST00000212123 3565 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm6773-201ENSMUST00000182377 878 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm18552-201ENSMUST00000187425 538 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 AC151971.6-201ENSMUST00000216193 866 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 CT025689.5-201ENSMUST00000224316 986 ntBASIC19.3■□□□□ 0.68
Ccdc180J3QNE4 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Vgll3-202ENSMUST00000227997 1383 ntBASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Gm42908-201ENSMUST00000197508 870 ntBASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Gm8991-201ENSMUST00000073014 1075 ntBASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc180J3QNE4 AC159195.3-201ENSMUST00000225162 2211 ntBASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm26021-201ENSMUST00000158664 131 ntBASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm18124-201ENSMUST00000210695 706 ntBASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Gm4883-201ENSMUST00000085702 528 ntBASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc180J3QNE4 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms