Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm3550W4VSN7 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Mir5132-201ENSMUST00000175166 71 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gm43520-201ENSMUST00000197996 164 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm3550W4VSN7 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Gm12663-201ENSMUST00000118481 958 ntBASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Gm16165-201ENSMUST00000160140 795 ntBASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Id2-203ENSMUST00000222667 958 ntBASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm3550W4VSN7 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms