Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ush1cQ9ES64 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Gm25661-201ENSMUST00000157704 296 ntBASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Gm10807-201ENSMUST00000177134 795 ntBASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.27□□□□□ -0.45
Ush1cQ9ES64 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Gm5714-201ENSMUST00000197343 566 ntBASIC12.27□□□□□ -0.45
Ush1cQ9ES64 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 AC153498.1-201ENSMUST00000219775 2722 ntBASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ush1cQ9ES64 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm13140-201ENSMUST00000119840 3151 ntBASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm22846-201ENSMUST00000157706 270 ntBASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm45856-201ENSMUST00000212752 416 ntBASIC12.26□□□□□ -0.45
Ush1cQ9ES64 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.26□□□□□ -0.45
Ush1cQ9ES64 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ush1cQ9ES64 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm38001-201ENSMUST00000192900 3761 ntBASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm11801-201ENSMUST00000117807 746 ntBASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm8459-201ENSMUST00000162504 760 ntBASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 AU022133-201ENSMUST00000200601 873 ntBASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Gm42867-201ENSMUST00000202995 469 ntBASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms