Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gm37597-201ENSMUST00000191853 382 ntBASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp4cQ9D7F7 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Gm11246-201ENSMUST00000120880 345 ntBASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Gm7255-201ENSMUST00000187371 908 ntBASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Gm30671-201ENSMUST00000214898 318 ntBASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Gm44888-201ENSMUST00000209119 2541 ntBASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Chmp4cQ9D7F7 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp4cQ9D7F7 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms