Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm11888-201ENSMUST00000120471 810 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm14156-201ENSMUST00000121538 483 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm40-201ENSMUST00000122131 660 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm13855-201ENSMUST00000145644 744 ntTSL 2 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm25947-201ENSMUST00000180343 110 ntBASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 AC154264.2-201ENSMUST00000216569 403 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh23Q99PF4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm28676-201ENSMUST00000188990 591 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm7384-201ENSMUST00000203682 530 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 AC167565.2-201ENSMUST00000227042 1870 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Abcc12-205ENSMUST00000152438 3083 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm6500-201ENSMUST00000119412 451 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm5684-201ENSMUST00000198419 961 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm29725-201ENSMUST00000206614 407 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Dbil5-201ENSMUST00000040806 581 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Defa21-201ENSMUST00000076754 418 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm7158-201ENSMUST00000120079 903 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm16470-201ENSMUST00000182456 998 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm43628-201ENSMUST00000197871 1187 ntBASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Gm44920-201ENSMUST00000206503 746 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh23Q99PF4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm16518-201ENSMUST00000117960 508 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm28922-201ENSMUST00000189785 308 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm42591-201ENSMUST00000197249 700 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 AC165260.2-202ENSMUST00000224998 631 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm28800-201ENSMUST00000186230 2243 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Sult6b2-201ENSMUST00000111768 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 CT009713.3-201ENSMUST00000224987 1565 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Sectm1a-202ENSMUST00000100126 680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm12551-201ENSMUST00000122073 726 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm15777-201ENSMUST00000123463 876 ntTSL 3 BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm37678-201ENSMUST00000192908 1146 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm45454-201ENSMUST00000211484 455 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 AC154687.1-201ENSMUST00000224875 677 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm8603-201ENSMUST00000115649 1515 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Atp5g1-204ENSMUST00000178611 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdh23Q99PF4 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms