Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm5764-201ENSMUST00000118817 885 ntBASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm13505-201ENSMUST00000121666 817 ntBASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm14699-201ENSMUST00000122340 228 ntBASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm20694-201ENSMUST00000176943 404 ntBASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm7539-201ENSMUST00000189789 630 ntBASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm19080-201ENSMUST00000196082 550 ntBASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 AC163638.2-201ENSMUST00000224920 827 ntBASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx6-1Q99MA9 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nkx6-1Q99MA9 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm14997-201ENSMUST00000119232 636 ntBASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm5311-201ENSMUST00000203518 709 ntBASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm8768-201ENSMUST00000220020 826 ntBASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms