Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Gm18801-201ENSMUST00000186616 536 ntBASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Gm37301-201ENSMUST00000195412 568 ntBASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Gm29763-201ENSMUST00000205306 616 ntBASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Gm26670-202ENSMUST00000226862 340 ntBASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps53Q8CCB4 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Mir671-201ENSMUST00000102432 98 ntBASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Gm11996-201ENSMUST00000117538 915 ntBASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Gm13019-201ENSMUST00000120000 276 ntBASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps53Q8CCB4 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Gm6855-201ENSMUST00000206307 790 ntBASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Gm2594-201ENSMUST00000214774 742 ntBASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps53Q8CCB4 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms