Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Gm9507-202ENSMUST00000180157 654 ntBASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Mir6941-201ENSMUST00000184711 59 ntBASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Gm6478-201ENSMUST00000099450 742 ntBASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm7052-201ENSMUST00000167568 1512 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm8216-201ENSMUST00000117232 601 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm11628-201ENSMUST00000117568 171 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm20414-201ENSMUST00000172918 646 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm23400-201ENSMUST00000174994 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm26463-201ENSMUST00000175065 101 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm24332-201ENSMUST00000175102 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm25959-201ENSMUST00000175112 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm22475-201ENSMUST00000175169 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm22903-201ENSMUST00000175193 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm25070-201ENSMUST00000175237 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm24159-201ENSMUST00000175264 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm25299-201ENSMUST00000175283 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm23798-201ENSMUST00000175560 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm23802-201ENSMUST00000175565 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm25708-201ENSMUST00000177687 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm24370-201ENSMUST00000178007 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm23049-201ENSMUST00000178068 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm28019-201ENSMUST00000178138 101 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm25571-201ENSMUST00000178322 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm25355-201ENSMUST00000178456 101 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm24975-201ENSMUST00000178492 101 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm23189-201ENSMUST00000178954 102 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm25100-201ENSMUST00000179750 101 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm23064-201ENSMUST00000179866 101 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm8601-201ENSMUST00000182096 909 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm37141-201ENSMUST00000191938 422 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm19566-201ENSMUST00000199576 610 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms