Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Gm4454-201ENSMUST00000190585 2578 ntBASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Gm13461-201ENSMUST00000120980 662 ntBASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Gm13263-201ENSMUST00000121271 838 ntBASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Gm6653-201ENSMUST00000218063 1288 ntBASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm43289-201ENSMUST00000200537 1475 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm9062-201ENSMUST00000117712 727 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm11801-201ENSMUST00000117807 746 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm8199-201ENSMUST00000121323 823 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 B9d1os-201ENSMUST00000137010 674 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm25661-201ENSMUST00000157704 296 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm18827-201ENSMUST00000188341 790 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm5982-201ENSMUST00000196234 512 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm5714-201ENSMUST00000197343 566 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm18753-201ENSMUST00000201000 566 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 CT009713.8-201ENSMUST00000225448 560 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Spcs1-203ENSMUST00000226374 592 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 AC154436.1-201ENSMUST00000227272 782 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm1821-202ENSMUST00000227415 750 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Ntng1-201ENSMUST00000051253 327 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm4784-201ENSMUST00000117365 1824 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Tsen54Q8C2A2 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Tsen54Q8C2A2 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Tsen54Q8C2A2 Gm37582-201ENSMUST00000192953 1409 ntBASIC8.97□□□□□ -0.97
Tsen54Q8C2A2 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Tsen54Q8C2A2 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Tsen54Q8C2A2 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Tsen54Q8C2A2 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms