Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm9062-201ENSMUST00000117712 727 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm19091-201ENSMUST00000208120 978 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm5599-201ENSMUST00000209602 788 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm16166-201ENSMUST00000118291 787 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm15573-201ENSMUST00000119487 540 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm11331-201ENSMUST00000119764 288 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smarcd3Q6P9Z1 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smarcd3Q6P9Z1 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smarcd3Q6P9Z1 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Smarcd3Q6P9Z1 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms