Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC14.15□□□□□ -0.14
Gli3Q61602 AC140244.1-201ENSMUST00000228454 229 ntBASIC14.15□□□□□ -0.14
Gli3Q61602 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 S100a10-201ENSMUST00000045756 685 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC14.15□□□□□ -0.14
Gli3Q61602 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gli3Q61602 CT009713.3-201ENSMUST00000224987 1565 ntBASIC14.15□□□□□ -0.14
Gli3Q61602 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gli3Q61602 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gli3Q61602 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.15□□□□□ -0.14
Gli3Q61602 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gli3Q61602 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.15□□□□□ -0.15
Gli3Q61602 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC14.14□□□□□ -0.15
Gli3Q61602 Gm15355-201ENSMUST00000118929 285 ntBASIC14.14□□□□□ -0.15
Gli3Q61602 Gm11203-201ENSMUST00000122169 741 ntBASIC14.14□□□□□ -0.15
Gli3Q61602 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Gm20508-201ENSMUST00000172480 487 ntTSL 2 BASIC14.14□□□□□ -0.15
Gli3Q61602 Kcne3-204ENSMUST00000179842 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gli3Q61602 CT025603.2-201ENSMUST00000224369 484 ntBASIC14.14□□□□□ -0.15
Gli3Q61602 AC107369.2-201ENSMUST00000226154 916 ntBASIC14.14□□□□□ -0.15
Gli3Q61602 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gli3Q61602 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gli3Q61602 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gli3Q61602 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Gm43585-201ENSMUST00000199375 1403 ntBASIC14.14□□□□□ -0.15
Gli3Q61602 Gm43340-201ENSMUST00000200448 1344 ntBASIC14.14□□□□□ -0.15
Gli3Q61602 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.14□□□□□ -0.15
Gli3Q61602 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gli3Q61602 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gli3Q61602 Cldn8-201ENSMUST00000049697 2356 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gli3Q61602 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gli3Q61602 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 n-R5s2-201ENSMUST00000101968 119 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 Gm25092-201ENSMUST00000103996 129 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 n-R5s194-201ENSMUST00000104719 119 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC14.13□□□□□ -0.15
Gli3Q61602 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC14.13□□□□□ -0.15
Gli3Q61602 Pcsk2os1-202ENSMUST00000156780 527 ntTSL 3 BASIC14.13□□□□□ -0.15
Gli3Q61602 n-R5s112-201ENSMUST00000178208 119 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 n-R5s125-201ENSMUST00000179377 119 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 n-R5s120-201ENSMUST00000180000 119 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 Gm7761-201ENSMUST00000190510 921 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC14.13□□□□□ -0.15
Gli3Q61602 Gm37643-201ENSMUST00000195369 1260 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 Rcvrn-201ENSMUST00000021290 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Gm13178-201ENSMUST00000036876 1227 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gli3Q61602 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gli3Q61602 n-R5s33-201ENSMUST00000093713 119 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gli3Q61602 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Gm45165-201ENSMUST00000207763 1631 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gli3Q61602 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gli3Q61602 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC14.13□□□□□ -0.15
Gli3Q61602 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Gm6768-201ENSMUST00000022467 1878 ntBASIC14.13□□□□□ -0.15
Gli3Q61602 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Gli3Q61602 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gli3Q61602 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms