Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ift88Q61371 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ift88Q61371 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC11.83□□□□□ -0.52
Ift88Q61371 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ift88Q61371 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Ift88Q61371 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ift88Q61371 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 Gm14585-201ENSMUST00000120713 634 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Gm10731-201ENSMUST00000181171 448 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.82□□□□□ -0.52
Ift88Q61371 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.82□□□□□ -0.52
Ift88Q61371 Gm9645-201ENSMUST00000197131 792 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.82□□□□□ -0.52
Ift88Q61371 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.82□□□□□ -0.52
Ift88Q61371 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ift88Q61371 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ift88Q61371 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.82□□□□□ -0.52
Ift88Q61371 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ift88Q61371 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.82□□□□□ -0.52
Ift88Q61371 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.82□□□□□ -0.52
Ift88Q61371 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ift88Q61371 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.82□□□□□ -0.52
Ift88Q61371 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Gm15236-201ENSMUST00000117309 379 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.81□□□□□ -0.52
Ift88Q61371 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ift88Q61371 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ift88Q61371 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Gm33080-201ENSMUST00000205429 172 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.81□□□□□ -0.52
Ift88Q61371 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ift88Q61371 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Gm37583-201ENSMUST00000195460 2487 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms