Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm40879-201ENSMUST00000220759 612 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 AC129597.1-201ENSMUST00000223046 1234 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm25514-201ENSMUST00000083860 135 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 BC043934-202ENSMUST00000185694 2356 ntBASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rc3h1Q4VGL6 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm15982-201ENSMUST00000121681 554 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm24346-201ENSMUST00000158712 194 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm27956-201ENSMUST00000175604 260 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm28746-201ENSMUST00000187453 380 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm20239-201ENSMUST00000196610 982 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Zmym2-202ENSMUST00000223669 1281 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.52□□□□□ -0.41
Rc3h1Q4VGL6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Gm22594-201ENSMUST00000104251 130 ntBASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Mir1249-201ENSMUST00000116791 98 ntBASIC12.51□□□□□ -0.41
Rc3h1Q4VGL6 Gm12943-201ENSMUST00000119616 210 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms