Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm45219-201ENSMUST00000205602 465 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm39288-201ENSMUST00000210554 446 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm9139-201ENSMUST00000218817 700 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Mir3547-201ENSMUST00000175461 88 ntBASIC11.42□□□□□ -0.58
Syne3Q4FZC9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.42□□□□□ -0.58
Syne3Q4FZC9 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.42□□□□□ -0.58
Syne3Q4FZC9 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gm11952-201ENSMUST00000121172 821 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gm29410-201ENSMUST00000188383 694 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Platr10-202ENSMUST00000191479 818 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gm5100-201ENSMUST00000195631 589 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gm3726-201ENSMUST00000203110 785 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gm9102-201ENSMUST00000219250 465 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.41□□□□□ -0.58
Syne3Q4FZC9 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Syne3Q4FZC9 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms