Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm24981-201ENSMUST00000104459 132 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm15661-201ENSMUST00000117390 556 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm12240-201ENSMUST00000120178 229 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm16560-201ENSMUST00000159115 404 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm3052-201ENSMUST00000186409 829 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm28916-201ENSMUST00000186988 699 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 AC161877.1-201ENSMUST00000227736 699 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Gm7001-201ENSMUST00000219384 1465 ntBASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gm38309-201ENSMUST00000192063 1518 ntBASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gm12072-201ENSMUST00000118293 715 ntBASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gm13071-201ENSMUST00000122237 376 ntBASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 H2-Pb-201ENSMUST00000172731 531 ntBASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gm5801-201ENSMUST00000182247 780 ntBASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 AC163351.1-201ENSMUST00000225539 737 ntBASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 AC164883.7-201ENSMUST00000228534 851 ntBASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Sf3b2Q3UJB0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gm24470-201ENSMUST00000104486 132 ntBASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Mir291b-201ENSMUST00000104838 79 ntBASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gm8661-201ENSMUST00000118688 992 ntBASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gm11686-201ENSMUST00000122397 333 ntBASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gm23916-201ENSMUST00000158484 399 ntBASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gm3355-201ENSMUST00000160079 487 ntBASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3b2Q3UJB0 Gm4398-201ENSMUST00000182698 992 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms