Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox8Q04886 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sox8Q04886 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Sox8Q04886 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sox8Q04886 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.32□□□□□ -0.6
Sox8Q04886 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC11.32□□□□□ -0.6
Sox8Q04886 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Gm5526-201ENSMUST00000153604 423 ntBASIC11.32□□□□□ -0.6
Sox8Q04886 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.32□□□□□ -0.6
Sox8Q04886 Gm9507-202ENSMUST00000180157 654 ntBASIC11.32□□□□□ -0.6
Sox8Q04886 Gm7985-201ENSMUST00000183329 981 ntBASIC11.32□□□□□ -0.6
Sox8Q04886 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Gm29763-201ENSMUST00000205306 616 ntBASIC11.32□□□□□ -0.6
Sox8Q04886 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.32□□□□□ -0.6
Sox8Q04886 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.32□□□□□ -0.6
Sox8Q04886 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.32□□□□□ -0.6
Sox8Q04886 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sox8Q04886 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.32□□□□□ -0.6
Sox8Q04886 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.32□□□□□ -0.6
Sox8Q04886 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox8Q04886 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox8Q04886 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sox8Q04886 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.31□□□□□ -0.6
Sox8Q04886 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.31□□□□□ -0.6
Sox8Q04886 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Sox8Q04886 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.31□□□□□ -0.6
Sox8Q04886 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox8Q04886 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sox8Q04886 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.31□□□□□ -0.6
Sox8Q04886 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox8Q04886 Gm13857-201ENSMUST00000139645 173 ntBASIC11.31□□□□□ -0.6
Sox8Q04886 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox8Q04886 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Sox8Q04886 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox8Q04886 Gm27956-201ENSMUST00000175604 260 ntBASIC11.31□□□□□ -0.6
Sox8Q04886 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox8Q04886 Mir8111-201ENSMUST00000184463 137 ntBASIC11.31□□□□□ -0.6
Sox8Q04886 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.31□□□□□ -0.6
Sox8Q04886 Gm18010-201ENSMUST00000203553 202 ntBASIC11.31□□□□□ -0.6
Sox8Q04886 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.31□□□□□ -0.6
Sox8Q04886 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms