Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1sQ02789 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.34□□□□□ -0.27
Cacna1sQ02789 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cacna1sQ02789 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC13.34□□□□□ -0.27
Cacna1sQ02789 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1sQ02789 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cacna1sQ02789 Gm12097-201ENSMUST00000121523 1414 ntBASIC13.34□□□□□ -0.27
Cacna1sQ02789 Depdc1b-205ENSMUST00000171178 1404 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Cacna1sQ02789 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1sQ02789 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1sQ02789 Lypd4-201ENSMUST00000079306 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1sQ02789 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1sQ02789 Ighv2-5-201ENSMUST00000103449 347 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Cacna1sQ02789 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cacna1sQ02789 Psd3-211ENSMUST00000178529 828 ntTSL 5 BASIC13.33□□□□□ -0.27
Cacna1sQ02789 Gm6098-201ENSMUST00000180234 330 ntBASIC13.33□□□□□ -0.27
Cacna1sQ02789 Gm42591-201ENSMUST00000197249 700 ntBASIC13.33□□□□□ -0.27
Cacna1sQ02789 AC154431.1-201ENSMUST00000224910 880 ntBASIC13.33□□□□□ -0.27
Cacna1sQ02789 AC160109.1-201ENSMUST00000225592 729 ntBASIC13.33□□□□□ -0.27
Cacna1sQ02789 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cacna1sQ02789 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cacna1sQ02789 Gm6960-201ENSMUST00000051629 639 ntBASIC13.33□□□□□ -0.27
Cacna1sQ02789 Gm10015-201ENSMUST00000072570 465 ntBASIC13.33□□□□□ -0.27
Cacna1sQ02789 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Cacna1sQ02789 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cacna1sQ02789 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cacna1sQ02789 Gm36638-202ENSMUST00000192073 2169 ntBASIC13.33□□□□□ -0.27
Cacna1sQ02789 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Spz1-201ENSMUST00000050658 1537 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1sQ02789 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.33□□□□□ -0.28
Cacna1sQ02789 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm5054-201ENSMUST00000119351 453 ntBASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm15798-201ENSMUST00000120082 408 ntBASIC13.33□□□□□ -0.28
Cacna1sQ02789 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC13.33□□□□□ -0.28
Cacna1sQ02789 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm5710-201ENSMUST00000183020 995 ntBASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm28676-201ENSMUST00000188990 591 ntTSL 5 BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm37559-201ENSMUST00000193556 832 ntBASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm44131-201ENSMUST00000203036 394 ntBASIC13.33□□□□□ -0.28
Cacna1sQ02789 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Als2cr12-201ENSMUST00000055313 1540 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1sQ02789 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 AC125487.1-201ENSMUST00000217888 1300 ntBASIC13.32□□□□□ -0.28
Cacna1sQ02789 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Gm12004-201ENSMUST00000117869 718 ntBASIC13.32□□□□□ -0.28
Cacna1sQ02789 Vpreb3-202ENSMUST00000121151 729 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Rit1-207ENSMUST00000172252 820 ntTSL 3 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Mir6354-201ENSMUST00000184979 116 ntBASIC13.32□□□□□ -0.28
Cacna1sQ02789 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 AC154766.1-201ENSMUST00000226550 936 ntBASIC13.32□□□□□ -0.28
Cacna1sQ02789 AC093022.2-202ENSMUST00000227500 866 ntBASIC13.32□□□□□ -0.28
Cacna1sQ02789 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Dcstamp-204ENSMUST00000227792 1367 ntBASIC13.32□□□□□ -0.28
Cacna1sQ02789 Gm9583-201ENSMUST00000219613 1843 ntBASIC13.32□□□□□ -0.28
Cacna1sQ02789 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1sQ02789 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1sQ02789 Gm12738-201ENSMUST00000122349 536 ntBASIC13.31□□□□□ -0.28
Cacna1sQ02789 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1sQ02789 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms