Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
SgcbP82349 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
SgcbP82349 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.7□□□□□ -0.86
SgcbP82349 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Gm22764-201ENSMUST00000158370 92 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC9.7□□□□□ -0.86
SgcbP82349 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
SgcbP82349 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Gm29107-201ENSMUST00000190910 347 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Gm37631-201ENSMUST00000192275 364 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Gm43787-201ENSMUST00000197792 1037 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Gm44216-201ENSMUST00000203942 157 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
SgcbP82349 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 CT030653.1-201ENSMUST00000224382 1279 ntBASIC9.7□□□□□ -0.86
SgcbP82349 AC152169.2-201ENSMUST00000224558 613 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Capsl-202ENSMUST00000226688 739 ntBASIC9.7□□□□□ -0.86
SgcbP82349 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.7□□□□□ -0.86
SgcbP82349 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
SgcbP82349 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SgcbP82349 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SgcbP82349 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.69□□□□□ -0.86
SgcbP82349 Gm13255-201ENSMUST00000117255 547 ntBASIC9.69□□□□□ -0.86
SgcbP82349 Gm14497-201ENSMUST00000119537 580 ntBASIC9.69□□□□□ -0.86
SgcbP82349 Gm13445-201ENSMUST00000121664 307 ntBASIC9.69□□□□□ -0.86
SgcbP82349 Gm12628-201ENSMUST00000122193 382 ntBASIC9.69□□□□□ -0.86
SgcbP82349 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.69□□□□□ -0.86
SgcbP82349 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.69□□□□□ -0.86
SgcbP82349 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
SgcbP82349 Gm6047-201ENSMUST00000167221 574 ntBASIC9.69□□□□□ -0.86
SgcbP82349 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC9.69□□□□□ -0.86
SgcbP82349 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC9.69□□□□□ -0.86
SgcbP82349 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SgcbP82349 Gm37365-201ENSMUST00000193109 409 ntBASIC9.69□□□□□ -0.86
SgcbP82349 Gm43066-201ENSMUST00000199589 1260 ntBASIC9.69□□□□□ -0.86
SgcbP82349 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.69□□□□□ -0.86
SgcbP82349 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms