Protein–RNA interactions for Protein: P81067

Irx3, Iroquois-class homeodomain protein IRX-3, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irx3P81067 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Irx3P81067 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Irx3P81067 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Irx3P81067 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Irx3P81067 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Irx3P81067 Gm37582-201ENSMUST00000192953 1409 ntBASIC13.64□□□□□ -0.23
Irx3P81067 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Irx3P81067 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.63□□□□□ -0.23
Irx3P81067 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Gm8459-201ENSMUST00000162504 760 ntBASIC13.63□□□□□ -0.23
Irx3P81067 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Gm37826-201ENSMUST00000195329 322 ntBASIC13.63□□□□□ -0.23
Irx3P81067 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.63□□□□□ -0.23
Irx3P81067 Gm18561-201ENSMUST00000206027 804 ntBASIC13.63□□□□□ -0.23
Irx3P81067 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.63□□□□□ -0.23
Irx3P81067 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.63□□□□□ -0.23
Irx3P81067 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Irx3P81067 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.63□□□□□ -0.23
Irx3P81067 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC13.63□□□□□ -0.23
Irx3P81067 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Irx3P81067 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Irx3P81067 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Irx3P81067 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.62□□□□□ -0.23
Irx3P81067 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Irx3P81067 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Irx3P81067 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Irx3P81067 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Irx3P81067 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC13.62□□□□□ -0.23
Irx3P81067 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Gm13549-201ENSMUST00000118339 796 ntBASIC13.62□□□□□ -0.23
Irx3P81067 Gm15615-201ENSMUST00000118876 198 ntBASIC13.62□□□□□ -0.23
Irx3P81067 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.62□□□□□ -0.23
Irx3P81067 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.62□□□□□ -0.23
Irx3P81067 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Irx3P81067 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Mt1-202ENSMUST00000211807 1085 ntBASIC13.62□□□□□ -0.23
Irx3P81067 Gm6722-201ENSMUST00000221586 390 ntBASIC13.62□□□□□ -0.23
Irx3P81067 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Irx3P81067 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.62□□□□□ -0.23
Irx3P81067 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Irx3P81067 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Irx3P81067 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC13.62□□□□□ -0.23
Irx3P81067 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.62□□□□□ -0.23
Irx3P81067 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Irx3P81067 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Irx3P81067 AC158779.1-201ENSMUST00000228912 3861 ntBASIC13.62□□□□□ -0.23
Irx3P81067 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC13.62□□□□□ -0.23
Irx3P81067 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Irx3P81067 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Irx3P81067 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Irx3P81067 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Irx3P81067 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Irx3P81067 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Irx3P81067 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Irx3P81067 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Irx3P81067 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC13.61□□□□□ -0.23
Irx3P81067 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms