Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hmgb1P63158 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
Hmgb1P63158 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hmgb1P63158 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.89□□□□□ -0.51
Hmgb1P63158 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.89□□□□□ -0.51
Hmgb1P63158 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.89□□□□□ -0.51
Hmgb1P63158 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hmgb1P63158 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Hmgb1P63158 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Gm11952-201ENSMUST00000121172 821 ntBASIC11.89□□□□□ -0.51
Hmgb1P63158 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Gm25343-201ENSMUST00000157460 107 ntBASIC11.89□□□□□ -0.51
Hmgb1P63158 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.89□□□□□ -0.51
Hmgb1P63158 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.89□□□□□ -0.51
Hmgb1P63158 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.89□□□□□ -0.51
Hmgb1P63158 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.89□□□□□ -0.51
Hmgb1P63158 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hmgb1P63158 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.89□□□□□ -0.51
Hmgb1P63158 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.89□□□□□ -0.51
Hmgb1P63158 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Hmgb1P63158 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hmgb1P63158 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm16071-201ENSMUST00000119589 793 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm26461-201ENSMUST00000175064 290 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.88□□□□□ -0.51
Hmgb1P63158 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm17826-201ENSMUST00000189720 798 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm37299-201ENSMUST00000193951 826 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.88□□□□□ -0.51
Hmgb1P63158 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm25580-201ENSMUST00000083409 327 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.88□□□□□ -0.51
Hmgb1P63158 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hmgb1P63158 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgb1P63158 Gm44914-201ENSMUST00000207191 2720 ntBASIC11.88□□□□□ -0.51
Hmgb1P63158 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.87□□□□□ -0.51
Hmgb1P63158 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms