Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Vbp1P61759 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Vbp1P61759 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Vbp1P61759 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC9.66□□□□□ -0.86
Vbp1P61759 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Gm15549-201ENSMUST00000121595 622 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.66□□□□□ -0.86
Vbp1P61759 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Vbp1P61759 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.66□□□□□ -0.86
Vbp1P61759 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Gm5714-201ENSMUST00000197343 566 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Rprl1-202ENSMUST00000198476 238 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Vbp1P61759 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Vbp1P61759 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Rph3a-204ENSMUST00000202406 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.66□□□□□ -0.86
Vbp1P61759 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Vbp1P61759 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Vbp1P61759 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.66□□□□□ -0.86
Vbp1P61759 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.66□□□□□ -0.86
Vbp1P61759 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Vbp1P61759 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Vbp1P61759 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.66□□□□□ -0.86
Vbp1P61759 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Vbp1P61759 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Vbp1P61759 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Vbp1P61759 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Vbp1P61759 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Vbp1P61759 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 March1-206ENSMUST00000110256 3288 ntTSL 5 BASIC9.65□□□□□ -0.86
Vbp1P61759 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Vbp1P61759 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Vbp1P61759 Gm8111-201ENSMUST00000117659 987 ntBASIC9.65□□□□□ -0.86
Vbp1P61759 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.65□□□□□ -0.86
Vbp1P61759 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.65□□□□□ -0.86
Vbp1P61759 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Vbp1P61759 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.65□□□□□ -0.86
Vbp1P61759 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.65□□□□□ -0.86
Vbp1P61759 Gm6867-201ENSMUST00000219165 425 ntBASIC9.65□□□□□ -0.86
Vbp1P61759 Gm7046-201ENSMUST00000221351 977 ntBASIC9.65□□□□□ -0.86
Vbp1P61759 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Vbp1P61759 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Vbp1P61759 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Vbp1P61759 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Vbp1P61759 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Vbp1P61759 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Vbp1P61759 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Vbp1P61759 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Vbp1P61759 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Vbp1P61759 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms