Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm14219-201ENSMUST00000120414 288 ntBASIC10.18□□□□□ -0.78
Nup43P59235 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC10.18□□□□□ -0.78
Nup43P59235 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.18□□□□□ -0.78
Nup43P59235 Gm24248-201ENSMUST00000157321 322 ntBASIC10.18□□□□□ -0.78
Nup43P59235 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.18□□□□□ -0.78
Nup43P59235 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.18□□□□□ -0.78
Nup43P59235 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.18□□□□□ -0.78
Nup43P59235 Gm7719-201ENSMUST00000182374 975 ntBASIC10.18□□□□□ -0.78
Nup43P59235 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nup43P59235 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.18□□□□□ -0.78
Nup43P59235 Gm18035-201ENSMUST00000211962 589 ntBASIC10.18□□□□□ -0.78
Nup43P59235 Gm9487-201ENSMUST00000216600 472 ntBASIC10.18□□□□□ -0.78
Nup43P59235 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.18□□□□□ -0.78
Nup43P59235 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.18□□□□□ -0.78
Nup43P59235 Gm26670-202ENSMUST00000226862 340 ntBASIC10.18□□□□□ -0.78
Nup43P59235 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nup43P59235 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
Nup43P59235 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
Nup43P59235 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nup43P59235 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nup43P59235 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.18□□□□□ -0.78
Nup43P59235 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nup43P59235 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup43P59235 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nup43P59235 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.17□□□□□ -0.78
Nup43P59235 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nup43P59235 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.17□□□□□ -0.78
Nup43P59235 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Gm8194-201ENSMUST00000159783 859 ntBASIC10.17□□□□□ -0.78
Nup43P59235 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Gm24809-201ENSMUST00000175318 271 ntBASIC10.17□□□□□ -0.78
Nup43P59235 Gm18014-201ENSMUST00000183369 817 ntBASIC10.17□□□□□ -0.78
Nup43P59235 Gm20781-201ENSMUST00000193154 693 ntBASIC10.17□□□□□ -0.78
Nup43P59235 Gm21736-201ENSMUST00000195399 693 ntBASIC10.17□□□□□ -0.78
Nup43P59235 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Nup43P59235 Gm45120-201ENSMUST00000208880 408 ntBASIC10.17□□□□□ -0.78
Nup43P59235 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
Nup43P59235 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.17□□□□□ -0.78
Nup43P59235 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup43P59235 Spata33-207ENSMUST00000212760 4074 ntBASIC10.17□□□□□ -0.78
Nup43P59235 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup43P59235 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms