Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Gm37909-201ENSMUST00000193157 2159 ntBASIC12.08□□□□□ -0.48
Rrp1P56183 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rrp1P56183 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Gm12389-201ENSMUST00000117696 418 ntBASIC12.08□□□□□ -0.48
Rrp1P56183 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Gm11952-201ENSMUST00000121172 821 ntBASIC12.08□□□□□ -0.48
Rrp1P56183 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Rrp1P56183 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rrp1P56183 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rrp1P56183 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.08□□□□□ -0.48
Rrp1P56183 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.08□□□□□ -0.48
Rrp1P56183 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Rrp1P56183 Gm37020-201ENSMUST00000195303 992 ntBASIC12.08□□□□□ -0.48
Rrp1P56183 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.08□□□□□ -0.48
Rrp1P56183 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rrp1P56183 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Rrp1P56183 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rrp1P56183 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rrp1P56183 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.08□□□□□ -0.48
Rrp1P56183 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12.08□□□□□ -0.48
Rrp1P56183 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rrp1P56183 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Rrp1P56183 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rrp1P56183 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rrp1P56183 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rrp1P56183 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rrp1P56183 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Gm14942-201ENSMUST00000119642 336 ntBASIC12.07□□□□□ -0.48
Rrp1P56183 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.07□□□□□ -0.48
Rrp1P56183 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.07□□□□□ -0.48
Rrp1P56183 Gm5523-201ENSMUST00000180415 997 ntBASIC12.07□□□□□ -0.48
Rrp1P56183 Gm19927-201ENSMUST00000185792 781 ntBASIC12.07□□□□□ -0.48
Rrp1P56183 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.07□□□□□ -0.48
Rrp1P56183 Gm42780-201ENSMUST00000197083 734 ntBASIC12.07□□□□□ -0.48
Rrp1P56183 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.07□□□□□ -0.48
Rrp1P56183 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.07□□□□□ -0.48
Rrp1P56183 Gm9132-201ENSMUST00000210182 832 ntBASIC12.07□□□□□ -0.48
Rrp1P56183 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rrp1P56183 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.07□□□□□ -0.48
Rrp1P56183 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.07□□□□□ -0.48
Rrp1P56183 Rims2-204ENSMUST00000226410 3685 ntBASIC12.07□□□□□ -0.48
Rrp1P56183 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Rrp1P56183 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.07□□□□□ -0.48
Rrp1P56183 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rrp1P56183 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rrp1P56183 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.06□□□□□ -0.48
Rrp1P56183 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.06□□□□□ -0.48
Rrp1P56183 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Gm19459-201ENSMUST00000176240 835 ntBASIC12.06□□□□□ -0.48
Rrp1P56183 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.06□□□□□ -0.48
Rrp1P56183 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms