Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm11540-201ENSMUST00000117457 780 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Gm11858-201ENSMUST00000117935 838 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Gm12978-201ENSMUST00000121250 522 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Gm24140-201ENSMUST00000122773 326 ntBASIC12.95□□□□□ -0.34
LtbrP50284 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Gm4207-201ENSMUST00000173144 960 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LtbrP50284 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LtbrP50284 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Gm43966-201ENSMUST00000203301 612 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.95□□□□□ -0.34
LtbrP50284 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.95□□□□□ -0.34
LtbrP50284 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
LtbrP50284 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.95□□□□□ -0.34
LtbrP50284 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.95□□□□□ -0.34
LtbrP50284 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LtbrP50284 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.95□□□□□ -0.34
LtbrP50284 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LtbrP50284 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.94□□□□□ -0.34
LtbrP50284 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.94□□□□□ -0.34
LtbrP50284 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.94□□□□□ -0.34
LtbrP50284 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.94□□□□□ -0.34
LtbrP50284 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.94□□□□□ -0.34
LtbrP50284 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LtbrP50284 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.94□□□□□ -0.34
LtbrP50284 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
LtbrP50284 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LtbrP50284 Mup-ps15-201ENSMUST00000121741 539 ntBASIC12.94□□□□□ -0.34
LtbrP50284 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC12.94□□□□□ -0.34
LtbrP50284 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.94□□□□□ -0.34
LtbrP50284 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC12.94□□□□□ -0.34
LtbrP50284 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LtbrP50284 Gm24111-201ENSMUST00000175491 97 ntBASIC12.94□□□□□ -0.34
LtbrP50284 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LtbrP50284 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Gm28195-201ENSMUST00000186992 372 ntBASIC12.94□□□□□ -0.34
LtbrP50284 Gm5254-201ENSMUST00000188353 977 ntBASIC12.94□□□□□ -0.34
LtbrP50284 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC12.94□□□□□ -0.34
LtbrP50284 Gm45401-201ENSMUST00000209456 733 ntBASIC12.94□□□□□ -0.34
LtbrP50284 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LtbrP50284 AC154515.3-201ENSMUST00000225081 1159 ntBASIC12.94□□□□□ -0.34
LtbrP50284 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.94□□□□□ -0.34
LtbrP50284 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LtbrP50284 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LtbrP50284 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LtbrP50284 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
LtbrP50284 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 Gm45885-202ENSMUST00000211520 1383 ntBASIC12.94□□□□□ -0.34
LtbrP50284 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LtbrP50284 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.93□□□□□ -0.34
LtbrP50284 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LtbrP50284 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LtbrP50284 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.93□□□□□ -0.34
LtbrP50284 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LtbrP50284 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LtbrP50284 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.93□□□□□ -0.34
LtbrP50284 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LtbrP50284 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LtbrP50284 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.93□□□□□ -0.34
LtbrP50284 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LtbrP50284 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LtbrP50284 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LtbrP50284 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
LtbrP50284 Gm13426-201ENSMUST00000117887 795 ntBASIC12.93□□□□□ -0.34
LtbrP50284 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LtbrP50284 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LtbrP50284 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LtbrP50284 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LtbrP50284 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LtbrP50284 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LtbrP50284 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LtbrP50284 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LtbrP50284 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms