Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rfx3P48381 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rfx3P48381 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rfx3P48381 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rfx3P48381 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.71□□□□□ -0.86
Rfx3P48381 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Rfx3P48381 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.7□□□□□ -0.86
Rfx3P48381 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Rfx3P48381 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Rfx3P48381 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Rfx3P48381 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.7□□□□□ -0.86
Rfx3P48381 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.7□□□□□ -0.86
Rfx3P48381 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Rfx3P48381 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Rfx3P48381 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Rfx3P48381 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.7□□□□□ -0.86
Rfx3P48381 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.7□□□□□ -0.86
Rfx3P48381 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.7□□□□□ -0.86
Rfx3P48381 Snord55-201ENSMUST00000174939 79 ntBASIC9.7□□□□□ -0.86
Rfx3P48381 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.7□□□□□ -0.86
Rfx3P48381 Gm30946-201ENSMUST00000198288 724 ntBASIC9.7□□□□□ -0.86
Rfx3P48381 Gm9661-201ENSMUST00000221611 1122 ntBASIC9.7□□□□□ -0.86
Rfx3P48381 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.7□□□□□ -0.86
Rfx3P48381 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Rfx3P48381 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Gm10179-201ENSMUST00000086233 688 ntBASIC9.7□□□□□ -0.86
Rfx3P48381 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC9.7□□□□□ -0.86
Rfx3P48381 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.7□□□□□ -0.86
Rfx3P48381 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Rfx3P48381 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rfx3P48381 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.7□□□□□ -0.86
Rfx3P48381 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Rfx3P48381 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.69□□□□□ -0.86
Rfx3P48381 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Rfx3P48381 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.69□□□□□ -0.86
Rfx3P48381 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Rfx3P48381 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.69□□□□□ -0.86
Rfx3P48381 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.69□□□□□ -0.86
Rfx3P48381 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.69□□□□□ -0.86
Rfx3P48381 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Gm5599-201ENSMUST00000209602 788 ntBASIC9.69□□□□□ -0.86
Rfx3P48381 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.69□□□□□ -0.86
Rfx3P48381 CT030637.1-201ENSMUST00000228016 669 ntBASIC9.69□□□□□ -0.86
Rfx3P48381 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms