Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rfx1P48377 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.79□□□□□ -0.36
Rfx1P48377 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfx1P48377 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rfx1P48377 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfx1P48377 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfx1P48377 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rfx1P48377 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.79□□□□□ -0.36
Rfx1P48377 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rfx1P48377 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rfx1P48377 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rfx1P48377 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Gm23272-201ENSMUST00000104053 129 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Mir877-201ENSMUST00000104738 85 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Gm11411-201ENSMUST00000117951 719 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Gm15352-201ENSMUST00000118696 270 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Gm15554-201ENSMUST00000120406 913 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Gm22144-201ENSMUST00000157402 102 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.78□□□□□ -0.36
Rfx1P48377 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Gm10774-201ENSMUST00000188689 204 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC12.78□□□□□ -0.36
Rfx1P48377 Mt1-202ENSMUST00000211807 1085 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.78□□□□□ -0.36
Rfx1P48377 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rfx1P48377 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rfx1P48377 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rfx1P48377 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC12.78□□□□□ -0.36
Rfx1P48377 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC12.78□□□□□ -0.36
Rfx1P48377 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx1P48377 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfx1P48377 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rfx1P48377 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx1P48377 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rfx1P48377 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rfx1P48377 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx1P48377 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx1P48377 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx1P48377 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx1P48377 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx1P48377 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.77□□□□□ -0.36
Rfx1P48377 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.77□□□□□ -0.37
Rfx1P48377 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx1P48377 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx1P48377 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rfx1P48377 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx1P48377 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.77□□□□□ -0.37
Rfx1P48377 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.77□□□□□ -0.37
Rfx1P48377 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx1P48377 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms