Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Pck2-205ENSMUST00000226352 2784 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Sox18P43680 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Gm8111-201ENSMUST00000117659 987 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Gm12345-201ENSMUST00000119288 898 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Gm12400-201ENSMUST00000120915 1003 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.71□□□□□ -0.69
Sox18P43680 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Gm24992-201ENSMUST00000157412 130 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Gm20694-201ENSMUST00000176943 404 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.71□□□□□ -0.69
Sox18P43680 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC10.71□□□□□ -0.69
Sox18P43680 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox18P43680 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox18P43680 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox18P43680 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sox18P43680 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sox18P43680 Id2-203ENSMUST00000222667 958 ntBASIC10.71□□□□□ -0.69
Sox18P43680 AC153646.1-201ENSMUST00000223229 1279 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sox18P43680 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Sox18P43680 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Cenpk-202ENSMUST00000070761 1306 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox18P43680 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox18P43680 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.71□□□□□ -0.69
Sox18P43680 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox18P43680 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox18P43680 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox18P43680 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox18P43680 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox18P43680 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox18P43680 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.71□□□□□ -0.7
Sox18P43680 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Sox18P43680 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sox18P43680 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox18P43680 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox18P43680 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.7□□□□□ -0.7
Sox18P43680 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sox18P43680 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox18P43680 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox18P43680 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox18P43680 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox18P43680 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox18P43680 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox18P43680 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Sox18P43680 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sox18P43680 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms