Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.77□□□□□ -0.85
Hmgn1P18608 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm11824-201ENSMUST00000120191 846 ntBASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Hmgn1P18608 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm6407-201ENSMUST00000176468 549 ntBASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm21092-201ENSMUST00000178995 955 ntBASIC9.77□□□□□ -0.85
Hmgn1P18608 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm7172-201ENSMUST00000218047 1152 ntBASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.77□□□□□ -0.85
Hmgn1P18608 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.77□□□□□ -0.85
Hmgn1P18608 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Hmgn1P18608 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.77□□□□□ -0.85
Hmgn1P18608 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Hmgn1P18608 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Hmgn1P18608 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmgn1P18608 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9.77□□□□□ -0.85
Hmgn1P18608 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Hmgn1P18608 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.76□□□□□ -0.85
Hmgn1P18608 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm12663-201ENSMUST00000118481 958 ntBASIC9.76□□□□□ -0.85
Hmgn1P18608 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm8737-201ENSMUST00000122208 642 ntBASIC9.76□□□□□ -0.85
Hmgn1P18608 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm23045-201ENSMUST00000175041 96 ntBASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm2260-201ENSMUST00000184965 657 ntBASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm37905-201ENSMUST00000195310 341 ntBASIC9.76□□□□□ -0.85
Hmgn1P18608 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.76□□□□□ -0.85
Hmgn1P18608 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.76□□□□□ -0.85
Hmgn1P18608 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.76□□□□□ -0.85
Hmgn1P18608 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgn1P18608 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgn1P18608 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.75□□□□□ -0.85
Hmgn1P18608 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgn1P18608 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.75□□□□□ -0.85
Hmgn1P18608 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hmgn1P18608 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgn1P18608 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hmgn1P18608 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgn1P18608 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgn1P18608 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Hmgn1P18608 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.75□□□□□ -0.85
Hmgn1P18608 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hmgn1P18608 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgn1P18608 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgn1P18608 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgn1P18608 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms