Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm26670-201ENSMUST00000180429 3287 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Gm9796-201ENSMUST00000062249 2250 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Gm44531-201ENSMUST00000208364 2000 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm26286-201ENSMUST00000104166 134 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Gm23912-201ENSMUST00000104687 87 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm12029-201ENSMUST00000120073 832 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Gm14441-201ENSMUST00000121960 540 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Cdx1P18111 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm15881-201ENSMUST00000148792 942 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm17391-201ENSMUST00000171036 126 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm37246-201ENSMUST00000192665 835 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Gm44126-201ENSMUST00000204831 514 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
Cdx1P18111 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC8.72□□□□□ -1.01
Cdx1P18111 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC8.72□□□□□ -1.01
Cdx1P18111 AC153954.1-201ENSMUST00000216959 255 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 CT009713.8-202ENSMUST00000224732 385 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm10288-201ENSMUST00000084614 537 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Cdx1P18111 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm12912-201ENSMUST00000121596 1381 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC8.72□□□□□ -1.01
Cdx1P18111 Gm18782-201ENSMUST00000209023 1399 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Gm9129-201ENSMUST00000218173 1689 ntBASIC8.72□□□□□ -1.01
Cdx1P18111 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cdx1P18111 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Cdx1P18111 Gm45289-201ENSMUST00000211048 2577 ntBASIC8.71□□□□□ -1.01
Cdx1P18111 Trpv5-202ENSMUST00000193503 2025 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Cdx1P18111 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Cdx1P18111 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cdx1P18111 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Cdx1P18111 AC159819.3-201ENSMUST00000216940 1837 ntBASIC8.71□□□□□ -1.01
Cdx1P18111 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cdx1P18111 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cdx1P18111 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cdx1P18111 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cdx1P18111 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm23061-201ENSMUST00000102348 116 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC8.71□□□□□ -1.02
Cdx1P18111 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cdx1P18111 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Cdx1P18111 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC8.71□□□□□ -1.02
Cdx1P18111 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm13888-201ENSMUST00000119148 422 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Gm11667-201ENSMUST00000119828 486 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC8.71□□□□□ -1.02
Cdx1P18111 Cd63-ps-202ENSMUST00000154992 717 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Rprl1-201ENSMUST00000158050 327 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Cdx1P18111 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Cdx1P18111 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC8.71□□□□□ -1.02
Cdx1P18111 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
Cdx1P18111 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm10774-201ENSMUST00000188689 204 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Gm42682-201ENSMUST00000198349 1265 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC8.71□□□□□ -1.02
Cdx1P18111 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC8.71□□□□□ -1.02
Cdx1P18111 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Cdx1P18111 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Cdx1P18111 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Mir219a-1-201ENSMUST00000083621 110 ntBASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms