Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC7.82□□□□□ -1.16
TcraP01849 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
TcraP01849 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC7.81□□□□□ -1.16
TcraP01849 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Gm37264-201ENSMUST00000194916 2192 ntBASIC7.81□□□□□ -1.16
TcraP01849 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
TcraP01849 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC7.81□□□□□ -1.16
TcraP01849 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC7.81□□□□□ -1.16
TcraP01849 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC7.81□□□□□ -1.16
TcraP01849 Nudt13-207ENSMUST00000224311 1574 ntBASIC7.81□□□□□ -1.16
TcraP01849 Gm9220-201ENSMUST00000190721 2544 ntBASIC7.81□□□□□ -1.16
TcraP01849 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Gm3765-201ENSMUST00000130985 1447 ntBASIC7.81□□□□□ -1.16
TcraP01849 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
TcraP01849 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC7.81□□□□□ -1.16
TcraP01849 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
TcraP01849 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC7.81□□□□□ -1.16
TcraP01849 Gm12012-201ENSMUST00000118857 1066 ntBASIC7.81□□□□□ -1.16
TcraP01849 Gm13350-201ENSMUST00000120519 479 ntBASIC7.81□□□□□ -1.16
TcraP01849 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC7.81□□□□□ -1.16
TcraP01849 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC7.81□□□□□ -1.16
TcraP01849 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Olfml3-204ENSMUST00000169286 874 ntBASIC7.81□□□□□ -1.16
TcraP01849 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Gm8343-201ENSMUST00000182705 994 ntBASIC7.81□□□□□ -1.16
TcraP01849 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC7.81□□□□□ -1.16
TcraP01849 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC7.81□□□□□ -1.16
TcraP01849 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Gm6082-201ENSMUST00000215204 454 ntBASIC7.81□□□□□ -1.16
TcraP01849 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Gm7172-201ENSMUST00000218047 1152 ntBASIC7.81□□□□□ -1.16
TcraP01849 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Gm26448-201ENSMUST00000082446 203 ntBASIC7.81□□□□□ -1.16
TcraP01849 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TcraP01849 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Gm45867-201ENSMUST00000208201 2317 ntBASIC7.81□□□□□ -1.16
TcraP01849 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC7.81□□□□□ -1.16
TcraP01849 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Gm43457-201ENSMUST00000200867 2409 ntBASIC7.81□□□□□ -1.16
TcraP01849 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Gm7103-201ENSMUST00000195642 1852 ntBASIC7.81□□□□□ -1.16
TcraP01849 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC7.81□□□□□ -1.16
TcraP01849 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
TcraP01849 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TcraP01849 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC7.8□□□□□ -1.16
TcraP01849 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Nod2-201ENSMUST00000054324 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Gm37582-201ENSMUST00000192953 1409 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms