Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.08□□□□□ -0.64
Atf6F6VAN0 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6F6VAN0 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm22902-201ENSMUST00000158488 302 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm8285-201ENSMUST00000208293 759 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.07□□□□□ -0.64
Atf6F6VAN0 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Atf6F6VAN0 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Mir453-201ENSMUST00000104732 82 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm14263-201ENSMUST00000117955 746 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm16518-201ENSMUST00000117960 508 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm11667-201ENSMUST00000119828 486 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm13182-201ENSMUST00000122241 312 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm22334-201ENSMUST00000158070 133 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm5244-201ENSMUST00000164001 339 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm26134-201ENSMUST00000178484 110 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Mir6407-201ENSMUST00000184510 101 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm5051-201ENSMUST00000204085 485 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.06□□□□□ -0.64
Atf6F6VAN0 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms