Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.73□□□□□ -0.85
Sec61a2Q9JLR1 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm15197-201ENSMUST00000120526 478 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm13182-201ENSMUST00000122241 312 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm24398-201ENSMUST00000157870 109 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm5778-201ENSMUST00000171003 1072 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm34023-201ENSMUST00000195539 217 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Sec61a2Q9JLR1 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sec61a2Q9JLR1 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm27438-201ENSMUST00000183480 110 ntBASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm5599-201ENSMUST00000209602 788 ntBASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm30671-201ENSMUST00000214898 318 ntBASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm6991-201ENSMUST00000218475 1178 ntBASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 AA474408-201ENSMUST00000098110 3339 ntBASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms