Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm5363-201ENSMUST00000211927 938 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm9111-201ENSMUST00000219394 709 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm8385-201ENSMUST00000058999 643 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim13Q9CYB0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm14028-201ENSMUST00000117434 479 ntBASIC9.96□□□□□ -0.82
Trim13Q9CYB0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm9540-201ENSMUST00000188230 478 ntBASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm29067-201ENSMUST00000190821 470 ntBASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm4482-201ENSMUST00000200876 742 ntBASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 CT025645.2-201ENSMUST00000223278 3827 ntBASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm21811-201ENSMUST00000096485 930 ntBASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms