Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 AC125409.3-201ENSMUST00000223488 653 ntBASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 AC154461.1-201ENSMUST00000224207 1005 ntBASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smarcd2Q99JR8 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm6939-201ENSMUST00000122029 864 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm26174-201ENSMUST00000158415 219 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm26208-201ENSMUST00000158677 124 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm17782-201ENSMUST00000174345 880 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm18164-201ENSMUST00000213769 927 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm18166-201ENSMUST00000215557 927 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm8557-201ENSMUST00000220777 475 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms