Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gm23595-201ENSMUST00000104306 130 ntBASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gm13204-201ENSMUST00000120110 821 ntBASIC12.7□□□□□ -0.38
Col20a1Q923P0 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gm3527-201ENSMUST00000198905 460 ntBASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gm44155-201ENSMUST00000203923 412 ntBASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.7□□□□□ -0.38
Col20a1Q923P0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col20a1Q923P0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm22495-201ENSMUST00000104492 126 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm26208-201ENSMUST00000158677 124 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm6291-201ENSMUST00000179994 309 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm27833-201ENSMUST00000184285 124 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Trav11n-201ENSMUST00000200113 343 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm6794-201ENSMUST00000203829 457 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.69□□□□□ -0.38
Col20a1Q923P0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col20a1Q923P0 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col20a1Q923P0 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.68□□□□□ -0.38
Col20a1Q923P0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col20a1Q923P0 Gm24933-201ENSMUST00000103762 110 ntBASIC12.68□□□□□ -0.38
Col20a1Q923P0 Gm23252-201ENSMUST00000103776 110 ntBASIC12.68□□□□□ -0.38
Col20a1Q923P0 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.68□□□□□ -0.38
Col20a1Q923P0 Gm13688-201ENSMUST00000121557 608 ntBASIC12.68□□□□□ -0.38
Col20a1Q923P0 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC12.68□□□□□ -0.38
Col20a1Q923P0 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms