Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm7805-201ENSMUST00000154348 448 ntBASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm20495-201ENSMUST00000173902 235 ntBASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm43811-201ENSMUST00000202862 695 ntBASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm18065-201ENSMUST00000221395 526 ntBASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm7589-201ENSMUST00000085631 534 ntBASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pcdhga6Q91XY2 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm9133-201ENSMUST00000118289 540 ntBASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm30946-201ENSMUST00000198288 724 ntBASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm43726-201ENSMUST00000199110 775 ntBASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga6Q91XY2 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdhga6Q91XY2 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms