Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ciao1-205ENSMUST00000174863 531 ntTSL 5 BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Kcne3-204ENSMUST00000179842 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Gm28922-201ENSMUST00000189785 308 ntBASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Gm44978-201ENSMUST00000206635 317 ntBASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Gm40604-201ENSMUST00000217765 655 ntTSL 5 BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Gm6960-201ENSMUST00000051629 639 ntBASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Tcl1b2-202ENSMUST00000142230 851 ntTSL 5 BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Rspo4os-201ENSMUST00000152229 1281 ntTSL 5 BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 1810007D17Rik-201ENSMUST00000187629 742 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Gm37270-201ENSMUST00000194277 330 ntBASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Gm43628-201ENSMUST00000197871 1187 ntBASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Gm5684-201ENSMUST00000198419 961 ntBASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 AC140244.1-201ENSMUST00000228454 229 ntBASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Gm43362-201ENSMUST00000198192 2470 ntBASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pabpn1Q8CCS6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm43760-201ENSMUST00000202120 3015 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm23027-201ENSMUST00000158771 158 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm3617-201ENSMUST00000173076 555 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm27941-201ENSMUST00000183418 142 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm27500-201ENSMUST00000184331 336 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Mir6972-201ENSMUST00000184774 64 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm37118-201ENSMUST00000194328 406 ntTSL 3 BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm23927-202ENSMUST00000199928 216 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm43002-201ENSMUST00000200310 155 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 9330159N22Rik-201ENSMUST00000221530 1031 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 AC159244.2-201ENSMUST00000222051 220 ntTSL 3 BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 AC165159.1-201ENSMUST00000223825 631 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm43127-201ENSMUST00000195890 2789 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Gm43869-201ENSMUST00000204742 1405 ntBASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pabpn1Q8CCS6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Gm28800-201ENSMUST00000186230 2243 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms