Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Alx1Q8C8B0 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.52□□□□□ -0.4
Alx1Q8C8B0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Alx1Q8C8B0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Alx1Q8C8B0 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Alx1Q8C8B0 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Alx1Q8C8B0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Alx1Q8C8B0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm11801-201ENSMUST00000117807 746 ntBASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm15782-201ENSMUST00000121073 445 ntBASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm13857-201ENSMUST00000139645 173 ntBASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm5274-201ENSMUST00000182641 1003 ntBASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm37390-201ENSMUST00000192452 872 ntBASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm45745-201ENSMUST00000211447 1180 ntBASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Alx1Q8C8B0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Gm8451-201ENSMUST00000170338 447 ntBASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Gm7539-201ENSMUST00000189789 630 ntBASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.51□□□□□ -0.41
Alx1Q8C8B0 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Gm5453-201ENSMUST00000080866 447 ntBASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Alx1Q8C8B0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Alx1Q8C8B0 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms