Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mir8093-201ENSMUST00000185043 137 ntBASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Gm5733-201ENSMUST00000190232 939 ntBASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Gm38117-201ENSMUST00000194653 939 ntBASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Tsen54Q8C2A2 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gm7851-201ENSMUST00000117574 323 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gm42682-201ENSMUST00000198349 1265 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gm43138-201ENSMUST00000199123 708 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gm43378-201ENSMUST00000199336 582 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gm45575-201ENSMUST00000210283 548 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gm5369-201ENSMUST00000217499 588 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 AC134860.1-201ENSMUST00000224867 660 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Gm44745-201ENSMUST00000206563 2723 ntBASIC9□□□□□ -0.97
Tsen54Q8C2A2 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Tsen54Q8C2A2 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC8.99□□□□□ -0.97
Tsen54Q8C2A2 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms