Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm15136-201ENSMUST00000120552 533 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm18801-201ENSMUST00000186616 536 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm43249-201ENSMUST00000200464 458 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 BC106175-202ENSMUST00000219344 1213 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm8325-201ENSMUST00000099086 453 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Gm43435-201ENSMUST00000199996 1438 ntBASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pcdh19Q80TF3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcdh19Q80TF3 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcdh19Q80TF3 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pcdh19Q80TF3 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pcdh19Q80TF3 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.65□□□□□ -0.71
Pcdh19Q80TF3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Pcdh19Q80TF3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm11893-201ENSMUST00000117829 491 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm20392-201ENSMUST00000173047 701 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm28195-201ENSMUST00000186992 372 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm40414-201ENSMUST00000197608 481 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm18204-201ENSMUST00000209835 793 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gm8162-201ENSMUST00000213951 665 ntBASIC10.64□□□□□ -0.71
Pcdh19Q80TF3 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms