Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm15881-201ENSMUST00000148792 942 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm29199-201ENSMUST00000187766 775 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm29543-201ENSMUST00000188138 967 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm37020-201ENSMUST00000195303 992 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm43097-201ENSMUST00000196867 151 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gm37909-201ENSMUST00000193157 2159 ntBASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rad54bQ6PFE3 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rad54bQ6PFE3 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rad54bQ6PFE3 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rad54bQ6PFE3 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms