Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smarcd3Q6P9Z1 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm11949-201ENSMUST00000117640 372 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Mir8115-201ENSMUST00000184992 119 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm17831-201ENSMUST00000205579 900 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Spcs1-203ENSMUST00000226374 592 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smarcd3Q6P9Z1 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
Smarcd3Q6P9Z1 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smarcd3Q6P9Z1 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms