Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Gm26046-201ENSMUST00000157312 166 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm20945-201ENSMUST00000178122 1145 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm37860-201ENSMUST00000195380 1034 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm44388-201ENSMUST00000204350 258 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm7424-201ENSMUST00000206919 902 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm30619-201ENSMUST00000213962 686 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 AC155300.1-201ENSMUST00000219134 480 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm6211-201ENSMUST00000147973 4275 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm27833-201ENSMUST00000184285 124 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm27383-201ENSMUST00000184418 361 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm7761-201ENSMUST00000190510 921 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm37858-201ENSMUST00000192759 1231 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 AC122024.3-201ENSMUST00000217719 294 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 AC125487.1-201ENSMUST00000217888 1300 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm36990-201ENSMUST00000191961 1412 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm29358-202ENSMUST00000187941 3227 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm7158-201ENSMUST00000120079 903 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm18118-201ENSMUST00000201064 645 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Gm21142-201ENSMUST00000179999 2604 ntBASIC8.21□□□□□ -1.09
NipblQ6KCD5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Gm45416-201ENSMUST00000209713 2201 ntBASIC8.21□□□□□ -1.09
NipblQ6KCD5 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Gm12904-201ENSMUST00000117451 1399 ntBASIC8.21□□□□□ -1.09
NipblQ6KCD5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NipblQ6KCD5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC8.21□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms