Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm25514-201ENSMUST00000083860 135 ntBASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gm11475-201ENSMUST00000118482 476 ntBASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gm15554-201ENSMUST00000120406 913 ntBASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gm13981-201ENSMUST00000122360 447 ntBASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gm17214-201ENSMUST00000164501 541 ntBASIC12.9□□□□□ -0.34
Vps54Q5SPW0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gm42859-201ENSMUST00000199572 193 ntBASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.9□□□□□ -0.34
Vps54Q5SPW0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps54Q5SPW0 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Vps54Q5SPW0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm11996-201ENSMUST00000117538 915 ntBASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm11354-201ENSMUST00000121974 422 ntBASIC12.89□□□□□ -0.35
Vps54Q5SPW0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.89□□□□□ -0.35
Vps54Q5SPW0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm44640-201ENSMUST00000206894 247 ntBASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 AC154806.7-201ENSMUST00000227998 202 ntBASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps54Q5SPW0 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms