Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm23935-201ENSMUST00000102303 57 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 Gm24270-201ENSMUST00000102326 57 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm24245-201ENSMUST00000157318 57 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 H2-Q3-201ENSMUST00000172583 608 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 Gm27023-201ENSMUST00000182372 285 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 Gm18893-201ENSMUST00000198416 943 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC8.78□□□□□ -1
Trim63Q38HM4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm9619-201ENSMUST00000211587 762 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm18829-201ENSMUST00000188150 1622 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim63Q38HM4 Tpmt-201ENSMUST00000021806 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim63Q38HM4 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC8.78□□□□□ -1
Trim63Q38HM4 4933427I04Rik-201ENSMUST00000097896 2183 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Trim63Q38HM4 Tia1-202ENSMUST00000095753 4477 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm4925-202ENSMUST00000168843 1561 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Acox2-201ENSMUST00000022271 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim63Q38HM4 Gm9978-201ENSMUST00000069431 3273 ntBASIC8.78□□□□□ -1
Trim63Q38HM4 Adamts4-201ENSMUST00000111314 3761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Trim63Q38HM4 Apol11b-201ENSMUST00000166623 2057 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1
Trim63Q38HM4 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trim63Q38HM4 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trim63Q38HM4 Sez6l2-202ENSMUST00000106333 3595 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Trim63Q38HM4 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Trim63Q38HM4 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC8.77□□□□□ -1.01
Trim63Q38HM4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.77□□□□□ -1.01
Trim63Q38HM4 Kidins220-202ENSMUST00000220459 5381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Lrit2-201ENSMUST00000057176 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gfpt1-201ENSMUST00000032057 2286 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm11489-201ENSMUST00000118342 499 ntBASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm13223-201ENSMUST00000118609 747 ntBASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm24074-201ENSMUST00000158178 260 ntBASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm19287-201ENSMUST00000203190 358 ntBASIC8.77□□□□□ -1.01
Trim63Q38HM4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm19994-201ENSMUST00000217086 586 ntBASIC8.77□□□□□ -1.01
Trim63Q38HM4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 AC154646.1-201ENSMUST00000225011 1092 ntBASIC8.77□□□□□ -1.01
Trim63Q38HM4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Col10a1-201ENSMUST00000105511 3130 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Kif28-203ENSMUST00000221136 3538 ntAPPRIS P5 TSL 5 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Hdac7-203ENSMUST00000116408 4226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Cyp2d22-201ENSMUST00000023083 2771 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Unc45b-205ENSMUST00000164945 3555 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 AC122197.1-201ENSMUST00000220281 2142 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Ddx24-206ENSMUST00000221211 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Tbx19-201ENSMUST00000027859 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms