Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Gm6352-201ENSMUST00000203583 1134 ntBASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pkd1l3Q2EG98 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm12947-201ENSMUST00000116114 420 ntBASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm3527-201ENSMUST00000198905 460 ntBASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm44498-201ENSMUST00000199509 111 ntBASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm5302-201ENSMUST00000202130 796 ntBASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm8873-201ENSMUST00000217847 1439 ntBASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pkd1l3Q2EG98 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Gm11470-201ENSMUST00000118868 1475 ntBASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 CT010505.2-201ENSMUST00000227918 998 ntBASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Pkd1l3Q2EG98 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Pkd1l3Q2EG98 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Pkd1l3Q2EG98 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Pkd1l3Q2EG98 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms