Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ebf1Q07802 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Ebf1Q07802 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm9166-201ENSMUST00000120293 561 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm25872-201ENSMUST00000177784 100 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm43002-201ENSMUST00000200310 155 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm7238-201ENSMUST00000206467 973 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm18001-201ENSMUST00000212023 688 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm19324-201ENSMUST00000213229 1169 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.98□□□□□ -0.65
Ebf1Q07802 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm6564-201ENSMUST00000075377 619 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Ebf1Q07802 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.98□□□□□ -0.65
Ebf1Q07802 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ebf1Q07802 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf1Q07802 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ebf1Q07802 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Gm11380-201ENSMUST00000118067 560 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 Gm8019-201ENSMUST00000119317 587 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Gm26313-201ENSMUST00000157770 308 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Gm7572-201ENSMUST00000182616 766 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 Gm18010-201ENSMUST00000203553 202 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.97□□□□□ -0.65
Ebf1Q07802 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Ebf1Q07802 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.97□□□□□ -0.65
Ebf1Q07802 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms