Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC17.3■□□□□ 0.36
Cux2P70298 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Gm19114-201ENSMUST00000193972 1357 ntBASIC17.3■□□□□ 0.36
Cux2P70298 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cux2P70298 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Gm13326-201ENSMUST00000118730 1011 ntBASIC17.3■□□□□ 0.36
Cux2P70298 Gm13413-201ENSMUST00000120953 602 ntBASIC17.3■□□□□ 0.36
Cux2P70298 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC17.3■□□□□ 0.36
Cux2P70298 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC17.3■□□□□ 0.36
Cux2P70298 Gm26679-201ENSMUST00000181685 659 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Hbq1a-201ENSMUST00000020535 604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC17.3■□□□□ 0.36
Cux2P70298 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC17.3■□□□□ 0.36
Cux2P70298 Zfp640-201ENSMUST00000071320 894 ntTSL 5 BASIC17.3■□□□□ 0.36
Cux2P70298 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cux2P70298 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cux2P70298 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Gm42851-201ENSMUST00000201325 1411 ntBASIC17.29■□□□□ 0.36
Cux2P70298 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.29■□□□□ 0.36
Cux2P70298 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cux2P70298 Gm43052-201ENSMUST00000201451 1628 ntBASIC17.29■□□□□ 0.36
Cux2P70298 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cux2P70298 Gm43362-201ENSMUST00000198192 2470 ntBASIC17.29■□□□□ 0.36
Cux2P70298 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cux2P70298 AC122860.2-201ENSMUST00000217967 2671 ntBASIC17.29■□□□□ 0.36
Cux2P70298 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC17.29■□□□□ 0.36
Cux2P70298 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC17.29■□□□□ 0.36
Cux2P70298 Gm6773-201ENSMUST00000182377 878 ntBASIC17.29■□□□□ 0.36
Cux2P70298 Mir6360-201ENSMUST00000184278 126 ntBASIC17.29■□□□□ 0.36
Cux2P70298 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cux2P70298 Gm17806-201ENSMUST00000195844 383 ntBASIC17.29■□□□□ 0.36
Cux2P70298 Gm6439-201ENSMUST00000199849 862 ntBASIC17.29■□□□□ 0.36
Cux2P70298 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 AC093022.2-202ENSMUST00000227500 866 ntBASIC17.29■□□□□ 0.36
Cux2P70298 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cux2P70298 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cux2P70298 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Vgll3-202ENSMUST00000227997 1383 ntBASIC17.28■□□□□ 0.36
Cux2P70298 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Gm43174-201ENSMUST00000195914 2445 ntBASIC17.28■□□□□ 0.36
Cux2P70298 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC17.28■□□□□ 0.36
Cux2P70298 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC17.28■□□□□ 0.36
Cux2P70298 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC17.28■□□□□ 0.36
Cux2P70298 Gm8488-201ENSMUST00000176112 1280 ntBASIC17.28■□□□□ 0.36
Cux2P70298 Gm10045-201ENSMUST00000178657 483 ntBASIC17.28■□□□□ 0.36
Cux2P70298 Gm5881-201ENSMUST00000204737 367 ntBASIC17.28■□□□□ 0.36
Cux2P70298 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC17.28■□□□□ 0.36
Cux2P70298 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cux2P70298 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cux2P70298 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC17.27■□□□□ 0.36
Cux2P70298 AC122840.1-201ENSMUST00000220915 3334 ntBASIC17.27■□□□□ 0.36
Cux2P70298 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cux2P70298 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cux2P70298 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cux2P70298 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cux2P70298 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cux2P70298 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cux2P70298 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cux2P70298 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cux2P70298 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cux2P70298 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms