Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Lsm6P62313 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm37058-201ENSMUST00000193393 1644 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm13117-201ENSMUST00000120894 691 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.47□□□□□ -0.89
Lsm6P62313 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC9.47□□□□□ -0.89
Lsm6P62313 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm18827-201ENSMUST00000188341 790 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm42657-201ENSMUST00000201746 211 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Gm44158-201ENSMUST00000203881 505 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Gm31941-201ENSMUST00000209689 350 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Lsm6P62313 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Lsm6P62313 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Lsm6P62313 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Lsm6P62313 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Lsm6P62313 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm6P62313 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm11892-201ENSMUST00000117711 1202 ntBASIC9.46□□□□□ -0.9
Lsm6P62313 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.46□□□□□ -0.9
Lsm6P62313 Gm10169-201ENSMUST00000121822 348 ntBASIC9.46□□□□□ -0.9
Lsm6P62313 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC9.46□□□□□ -0.9
Lsm6P62313 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm8531-201ENSMUST00000188319 893 ntBASIC9.46□□□□□ -0.9
Lsm6P62313 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Lsm6P62313 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm4811-201ENSMUST00000220879 1220 ntBASIC9.46□□□□□ -0.9
Lsm6P62313 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.46□□□□□ -0.9
Lsm6P62313 AC102368.1-201ENSMUST00000227161 892 ntBASIC9.46□□□□□ -0.9
Lsm6P62313 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Lsm6P62313 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Lsm6P62313 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms